SBMLFromExcel

 SBMLFromExcel
   Converts a model in the Excel format to SBML

   fileName        the Excel file
   outputFileName  the SBML file
   toCOBRA         true if the model should be saved in COBRA Toolbox
                   format. Only limited support at the moment (opt,
                   default false)
   printWarnings   true if warnings about model issues should be reported
                   (opt, default true)

   For a detailed description of the file format, see the supplied manual.

   Usage: SBMLFromExcel(fileName,outputFileName,toCOBRA,printWarnings)

   NOTE: This is just a wrapper function for importExcelModel, printModelStats
   and exportModel. Use those functions directly for greater control.

0001 function SBMLFromExcel(fileName, outputFileName,toCOBRA,printWarnings)
0002 % SBMLFromExcel
0003 %   Converts a model in the Excel format to SBML
0004 %
0005 %   fileName        the Excel file
0006 %   outputFileName  the SBML file
0007 %   toCOBRA         true if the model should be saved in COBRA Toolbox
0008 %                   format. Only limited support at the moment (opt,
0009 %                   default false)
0010 %   printWarnings   true if warnings about model issues should be reported
0011 %                   (opt, default true)
0012 %
0013 %   For a detailed description of the file format, see the supplied manual.
0014 %
0015 %   Usage: SBMLFromExcel(fileName,outputFileName,toCOBRA,printWarnings)
0016 %
0017 %   NOTE: This is just a wrapper function for importExcelModel, printModelStats
0018 %   and exportModel. Use those functions directly for greater control.
0019 fileName=char(fileName);
0020 outputFileName=char(outputFileName);
0021 if nargin<3
0022     toCOBRA=false;
0023 end
0024 if nargin<4
0025     printWarnings=true;
0026 end
0027 
0028 model=importExcelModel(fileName,false,printWarnings);
0029 printModelStats(model,printWarnings,false);
0030 exportModel(model,outputFileName,toCOBRA,true);
0031 end